Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851171.1_cds_XP_016511407.1_24150
CDS Infomation

[gene=LOC107828579] [db_xref=GeneID:107828579] [protein=glucan endo-1,3-beta-glucosidase 8-like] [protein_id=XP_016511407.1] [location=join(37080..37399,39111..40215)] [gbkey=CDS]
Sequence

ATGTTGAAAGTTGGGATATTTGTGGTTTGTTTATTGTATTTGAGTGAGGTGGAAGGTCTA
GGAGTGAACTGGGGAACAATGGCAATGCACAAGTTGCCACCAAAAACAGTGGTGCAGCTG
CTGAAGGACAATGGTATTGGGAAGGTGAAGCTGTTTGATGCAGATCAATCAACCATGAGT
GCTCTTGCTGGTACTGATATTGAAGTTATGGTTGCCATTCCCAATGATCAGCTTTCTGCT
ATGAATGATTATGATCGAGCTAAAGATTGGGTCAGACGCAATGTCACCCGCTACAATTTC
AAAGGAGGTGTCAATATCAAGTATGTTGCAGTGGGTAATGAGCCTTTCTTGACATCGTAC
AACAACTCCTTTATTAACACGACCTTCCCAGCACTTCAGAACATCCAAAATGCTCTAAAT
GAAGCAGGACTTGGGAACTCTATAAAAGCAACTGTACCTCTAAATGCCGATGTTTATTTC
TCTCCAGAGAGCAATCCCGTGCCCTCTGCTGGGAGATTCCGACAGGACATTAATGATCTA
ATGACCCAGATGGTGCAGTTCATGAACCAGAACAACGCACCTTTCACAGTAAACATTTAC
CCCTTTCTGAGTCTTTATGCTAACGAGCATTTCCCTGTCGACTTTGCCTTCTTTGATGGA
GCCAGTAGCCCCATTCTTGATAAAGGAGTCACATACACCAATGTATTTGATGCCAACTTT
GATACCCTAGTTTCAGCTTTGAGGGCAGCAGGTGTTGGCAACATGACCATTCTTGTTGGG
GAAGTTGGGTGGCCCACGGATGGTGACAAAAATGCCAATGTCAATCTTGCTTATCGGTTT
TATAAGGGGCTGTTATCCAGGCTTGCAGCCAACACAGGAACGCCTCTTCGGCCTGGATAT
ATTGAAGTTTACTTGTTTGGGCTTATCGACGAGGATGGTAAAAGTATTGCTCCTGGTAAC
TTTGAGCGCCACTGGGGAATCTTCCGGTATGATGGACAGCCAAAGTTTGCCATGGACCTT
ACAGGTCAGGGACAAGATAAGTTTCTGGTAGGTGCACAAAATGTGGAATATTTACCTAAG
AAATGGTGCATGCTTAATCCGAATGCCAAGGATTTGAGCAAACTTGCAGATAACATCAAC
TATGCTTGCACATTCTCAGATTGCACGGCATTAGGATATGGTTCTTCGTGCAATGGTTTG
GATGCAAATGGTAATGCATCATATGCATTTAATATGTATTACCAAGCTCAGAACCAAGGA
GATTTCAGTTGTGGTTTTCAGGGTCTGGCAATGGTAACGGATCAGAATATATCTCAAGCA
AACTGTAATTTCACCATCCAGATAGCTTATTCTTTCTCTCCAAAACTATTGCCAGGCCCA
GGGGTCATCGCATTTCTTACTGCCTTCACATTTATTTTACTATAG

Peptide Sequence

PEP ID

XP_016511407.1
PEP Infomation

PREDICTED: glucan endo-1,3-beta-glucosidase 8-like [Nicotiana tabacum]
Sequence

MLKVGIFVVCLLYLSEVEGLGVNWGTMAMHKLPPKTVVQLLKDNGIGKVKLFDADQSTMS
ALAGTDIEVMVAIPNDQLSAMNDYDRAKDWVRRNVTRYNFKGGVNIKYVAVGNEPFLTSY
NNSFINTTFPALQNIQNALNEAGLGNSIKATVPLNADVYFSPESNPVPSAGRFRQDINDL
MTQMVQFMNQNNAPFTVNIYPFLSLYANEHFPVDFAFFDGASSPILDKGVTYTNVFDANF
DTLVSALRAAGVGNMTILVGEVGWPTDGDKNANVNLAYRFYKGLLSRLAANTGTPLRPGY
IEVYLFGLIDEDGKSIAPGNFERHWGIFRYDGQPKFAMDLTGQGQDKFLVGAQNVEYLPK
KWCMLNPNAKDLSKLADNINYACTFSDCTALGYGSSCNGLDANGNASYAFNMYYQAQNQG
DFSCGFQGLAMVTDQNISQANCNFTIQIAYSFSPKLLPGPGVIAFLTAFTFILL

Transcript Sequence

Gene sequence data has not been registered.